We are going to make use of the susceptibility, specificity, and you can p-worthy of in our analytical investigations
where in fact the hypergeometric setting provides the likelihood of looking for exactly x of the H gold standard positive residues in the a couple of Meters residues at random selected about inhabitants numbering D:
p-worthy of try a particularly beneficial numbers, as it compares right to haphazard selecting. The three amount might be accustomed assess the around three products from FlexOracle and compare with GNM, enough time a popular freedom prediction formula.
Single-cut predictors and you may GNM
I initiate our analytical testing on the TINKER and you can FoldX types of the unmarried-reduce predictor. I simply take since our very own test pros men and women residues recognized as local minima according to the formula demonstrated in the Tips area, then tabulate the various statistical volume each the above mentioned meanings. GNM need a slightly different medication. To test this predictor, we compute absolutely the value of the original normal means displacements and you can normalize so it number to are priced between 0 to 1. The latest nodes, or facts away from no displacement, are brought to match new depend place. (περισσότερα…)